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  5. LOC_Os01g42740.1

LOC_Os01g42740.1


Description : Ammonium transporter 2 member 1 OS=Oryza sativa subsp. japonica (sp|q84kj7|amt21_orysj : 173.0)


Gene families : OG0000634 (Archaeplastida) Phylogenetic Tree(s): OG0000634_tree ,
OG_05_0000613 (LandPlants) Phylogenetic Tree(s): OG_05_0000613_tree ,
OG_06_0000890 (SeedPlants) Phylogenetic Tree(s): OG_06_0000890_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g42740.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00138130 evm_27.TU.AmTr_v1... Solute transport.channels.AMT family.ammonium... 0.06 Archaeplastida
LOC_Os03g62200.1 No alias ammonium transporter (AMT2/3) 0.04 Archaeplastida
MA_55379g0010 No alias ammonium transporter (AMT2/3) 0.02 Archaeplastida
Solyc09g065740.2.1 No alias ammonium transporter (AMT2/3) 0.03 Archaeplastida
Solyc10g076480.2.1 No alias ammonium transporter (AMT2/3) 0.03 Archaeplastida
Zm00001e006300_P002 No alias ammonium transporter (AMT2/3) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
BP GO:0015696 ammonium transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 7 68
No external refs found!