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  5. AMTR_s00002p00182280

AMTR_s00002p00182280 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.158

No description available


Gene families : OG0000166 (Archaeplastida) Phylogenetic Tree(s): OG0000166_tree ,
OG_05_0000070 (LandPlants) Phylogenetic Tree(s): OG_05_0000070_tree ,
OG_06_0000023 (SeedPlants) Phylogenetic Tree(s): OG_06_0000023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00182280
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00264890 No alias No description available 0.01 Archaeplastida
AMTR_s00004p00044490 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00009p00075930 No alias No description available 0.01 Archaeplastida
AMTR_s00013p00252720 No alias No description available 0.01 Archaeplastida
AMTR_s00016p00137020 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00023p00023350 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00033p00196950 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00033p00217360 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00039p00101600 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00046p00145130 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00048p00220490 No alias No description available 0.05 Archaeplastida
AMTR_s00050p00195600 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s00053p00120970 No alias No description available 0.03 Archaeplastida
AMTR_s00078p00132690 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00081p00034970 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00121p00069000 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00156p00047380 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00214p00028540 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s01790p00008340 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s02984p00006270 evm_27.TU.AmTr_v1... No description available 0.01 Archaeplastida
AMTR_s03250p00004260 No alias No description available 0.01 Archaeplastida
AMTR_s03891p00003510 No alias No description available 0.03 Archaeplastida
AMTR_s05067p00004370 No alias No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007021 DUF659 18 117
No external refs found!