BP GO:0048193 Golgi vesicle transport None Extended BP GO:0051179 localization None Extended BP GO:0051234 establishment of localization None Extended BP GO:0051641 cellular localization None Extended BP GO:0051649 establishment of localization in cell None Extended BP GO:0070085 glycosylation None Extended BP GO:0070727 cellular macromolecule localization None Extended BP GO:0071702 organic substance transport None Extended BP GO:0071704 organic substance metabolic process None Extended BP GO:0071705 nitrogen compound transport None Extended BP GO:0072594 establishment of protein localization to organelle None Extended BP GO:0072665 protein localization to vacuole None Extended BP GO:0072666 establishment of protein localization to vacuole None Extended CC GO:0098791 Golgi subcompartment None Extended CC GO:0099023 tethering complex None Extended BP GO:1901564 organonitrogen compound metabolic process None Extended
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LOC_Os01g43870.1 details

LOC_Os01g43870.1


Description : RNA polymerase-II phosphatase. subcluster B phosphatase


Gene families : OG0001038 (Archaeplastida) Phylogenetic Tree(s): OG0001038_tree ,
OG_05_0001790 (LandPlants) Phylogenetic Tree(s): OG_05_0001790_tree ,
OG_06_0002386 (SeedPlants) Phylogenetic Tree(s): OG_06_0002386_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
BP GO:0000209 protein polyubiquitination IEP Neighborhood
BP GO:0000278 mitotic cell cycle IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004656 procollagen-proline 4-dioxygenase activity IEP Neighborhood
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006301 postreplication repair IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009640 photomorphogenesis IEP Neighborhood
BP GO:0010099 regulation of photomorphogenesis IEP Neighborhood
BP GO:0010100 negative regulation of photomorphogenesis IEP
Type Description Actions
Neighborhood HRR: LOC_Os01g43870.1
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.172 No alias Protein modification.dephosphorylation.aspartate-based... 0.01 Archaeplastida
Cpa|evm.model.tig00020909.26 No alias No description available 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
InterPro domains Description Start Stop
IPR004274 FCP1_dom 288 448
No external refs found!