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  5. LOC_Os01g45550.1

LOC_Os01g45550.1


Description : auxin transporter (PIN). auxin efflux transporter (PIN)


Gene families : OG0000353 (Archaeplastida) Phylogenetic Tree(s): OG0000353_tree ,
OG_05_0000237 (LandPlants) Phylogenetic Tree(s): OG_05_0000237_tree ,
OG_06_0000465 (SeedPlants) Phylogenetic Tree(s): OG_06_0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g45550.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00250330 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
AMTR_s00038p00079560 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.05 Archaeplastida
AMTR_s00101p00149240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
AT1G23080 PIN7, ATPIN7 Auxin efflux carrier family protein 0.05 Archaeplastida
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.05 Archaeplastida
AT1G77110 PIN6 Auxin efflux carrier family protein 0.04 Archaeplastida
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.06 Archaeplastida
GSVIVT01008430001 No alias Solute transport.carrier-mediated transport.BART... 0.06 Archaeplastida
GSVIVT01010025001 No alias Solute transport.carrier-mediated transport.BART... 0.05 Archaeplastida
GSVIVT01011347001 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
GSVIVT01019110001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
GSVIVT01019125001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
GSVIVT01025748001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
GSVIVT01025749001 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
GSVIVT01029266001 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
GSVIVT01031663001 No alias Solute transport.carrier-mediated transport.BART... 0.05 Archaeplastida
Gb_02144 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Gb_23207 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Gb_37787 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
LOC_Os01g58860.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.08 Archaeplastida
LOC_Os02g50960.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os06g12610.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
LOC_Os06g44970.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
MA_10433084g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
MA_61553g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
MA_61553g0020 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.08 Archaeplastida
Mp3g21660.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Mp5g05150.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Mp6g07950.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Pp3c10_24880V3.1 No alias Auxin efflux carrier family protein 0.03 Archaeplastida
Pp3c23_10200V3.1 No alias Auxin efflux carrier family protein 0.07 Archaeplastida
Pp3c24_2970V3.1 No alias Auxin efflux carrier family protein 0.04 Archaeplastida
Smo119024 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
Smo234325 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
Smo99301 No alias Solute transport.carrier-mediated transport.BART... 0.05 Archaeplastida
Solyc01g068410.4.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Solyc06g059730.3.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 Archaeplastida
Solyc07g006900.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.08 Archaeplastida
Solyc10g078370.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Solyc10g080880.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Zm00001e010118_P004 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
Zm00001e015800_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 Archaeplastida
Zm00001e019540_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Zm00001e019973_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Zm00001e020346_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
Zm00001e024071_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 Archaeplastida
Zm00001e036089_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
Zm00001e036414_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Zm00001e037682_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 491
No external refs found!