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  5. AMTR_s00002p00197170

AMTR_s00002p00197170 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.181

Description : Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica


Gene families : OG0001173 (Archaeplastida) Phylogenetic Tree(s): OG0001173_tree ,
OG_05_0000722 (LandPlants) Phylogenetic Tree(s): OG_05_0000722_tree ,
OG_06_0000560 (SeedPlants) Phylogenetic Tree(s): OG_06_0000560_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00197170
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00197000 evm_27.TU.AmTr_v1... Putative ripening-related protein 1 OS=Oryza sativa... 0.03 Archaeplastida
GSVIVT01017327001 No alias Putative ripening-related protein 1 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os02g42450.1 No alias Putative ripening-related protein 2 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os04g29550.1 No alias Putative ripening-related protein 1 OS=Oryza sativa... 0.07 Archaeplastida
MA_7283265g0010 No alias Ripening-related protein grip22 OS=Vitis vinifera... 0.03 Archaeplastida
Pp3c5_25540V3.1 No alias No annotation 0.02 Archaeplastida
Smo99172 No alias Ripening-related protein grip22 OS=Vitis vinifera 0.03 Archaeplastida
Solyc01g094450.1.1 No alias Putative ripening-related protein 2 OS=Oryza sativa... 0.02 Archaeplastida
Solyc05g042020.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g069870.1.1 No alias Kiwellin OS=Actinidia deliciosa (sp|p84527|kiwel_actde : 170.0) 0.02 Archaeplastida
Solyc11g069880.1.1 No alias Kiwellin OS=Actinidia deliciosa (sp|p84527|kiwel_actde : 219.0) 0.03 Archaeplastida
Zm00001e006733_P001 No alias Putative ripening-related protein 5 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e012609_P001 No alias no description available(sp|a0a1d6gnr3|kwl1_maize : 331.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!