AMTR_s00002p00197500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.182

Description : Protein TORNADO 2 OS=Arabidopsis thaliana


Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree ,
OG_06_0000242 (SeedPlants) Phylogenetic Tree(s): OG_06_0000242_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00197500
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AT3G12090 TET6 tetraspanin6 0.05 Archaeplastida
GSVIVT01013147001 No alias Protein TORNADO 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01016305001 No alias Tetraspanin-5 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_00679 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g03140.1 No alias Tetraspanin-3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g16050.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.08 Archaeplastida
MA_10426935g0010 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_139843g0010 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_24323g0010 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_331856g0010 No alias Tetraspanin-10 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_485622g0010 No alias Tetraspanin-2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c21_1270V3.1 No alias tetraspanin8 0.02 Archaeplastida
Smo231326 No alias Tetraspanin-3 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo266767 No alias Tetraspanin-8 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc04g049080.4.1 No alias Tetraspanin-5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc12g010570.1.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e027574_P006 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e028243_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e029484_P001 No alias Tetraspanin-6 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e030929_P001 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e032372_P001 No alias Tetraspanin-5 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 5 160
No external refs found!