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  5. AMTR_s00002p00198490

AMTR_s00002p00198490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.185

No description available


Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0035732 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00198490
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01028719001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
LOC_Os02g52190.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_686524g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c22_14220V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc01g080050.4.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g074810.4.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc09g091760.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e003394_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e014279_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e024824_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e026643_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e037075_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008883 glutamyl-tRNA reductase activity IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0016032 viral process IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0044403 symbiont process IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!