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  5. LOC_Os01g47780.1

LOC_Os01g47780.1


Description : fasciclin-type arabinogalactan protein


Gene families : OG0000994 (Archaeplastida) Phylogenetic Tree(s): OG0000994_tree ,
OG_05_0000629 (LandPlants) Phylogenetic Tree(s): OG_05_0000629_tree ,
OG_06_0000746 (SeedPlants) Phylogenetic Tree(s): OG_06_0000746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g47780.1
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00224100 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AMTR_s00007p00166710 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
AMTR_s00393p00013250 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AT1G03870 FLA9 FASCICLIN-like arabinoogalactan 9 0.08 Archaeplastida
AT2G04780 FLA7 FASCICLIN-like arabinoogalactan 7 0.05 Archaeplastida
AT2G20520 FLA6 FASCICLIN-like arabinogalactan 6 0.04 Archaeplastida
AT5G03170 ATFLA11, FLA11 FASCICLIN-like arabinogalactan-protein 11 0.03 Archaeplastida
AT5G60490 FLA12 FASCICLIN-like arabinogalactan-protein 12 0.04 Archaeplastida
GSVIVT01025167001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
GSVIVT01025660001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
GSVIVT01025662001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01025671001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
LOC_Os02g20560.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os04g39600.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Solyc06g075220.1.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Solyc07g053540.1.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Solyc09g007650.3.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Solyc09g007660.1.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Solyc11g069250.2.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e010053_P001 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e020209_P002 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Zm00001e024362_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e026526_P001 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Zm00001e027481_P001 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 47 183
No external refs found!