1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g48320.1

LOC_Os01g48320.1


Description : transcription factor (Trihelix)


Gene families : OG0000562 (Archaeplastida) Phylogenetic Tree(s): OG0000562_tree ,
OG_05_0000321 (LandPlants) Phylogenetic Tree(s): OG_05_0000321_tree ,
OG_06_0000571 (SeedPlants) Phylogenetic Tree(s): OG_06_0000571_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g48320.1
Cluster HCCA: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00065350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.02 Archaeplastida
AT3G14180 No alias sequence-specific DNA binding transcription factors 0.03 Archaeplastida
AT3G24490 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.02 Archaeplastida
GSVIVT01016139001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 Archaeplastida
Gb_18984 No alias transcription factor (Trihelix) 0.03 Archaeplastida
MA_10430713g0010 No alias transcription factor (Trihelix) 0.04 Archaeplastida
MA_6829664g0010 No alias transcription factor (Trihelix) 0.02 Archaeplastida
Mp4g09730.1 No alias transcription factor (Trihelix) 0.03 Archaeplastida
Zm00001e020188_P001 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Zm00001e032412_P001 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Zm00001e040951_P001 No alias transcription factor (Trihelix) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!