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  5. LOC_Os01g49160.1

LOC_Os01g49160.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000210 (SeedPlants) Phylogenetic Tree(s): OG_06_0000210_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g49160.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00037p00177500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AT1G09540 ATMYB61, MYB61 myb domain protein 61 0.01 Archaeplastida
AT1G18570 AtMYB51, BW51B,... myb domain protein 51 0.02 Archaeplastida
AT2G32460 ATMYB101, MYB101, ATM1 myb domain protein 101 0.01 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.01 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.01 Archaeplastida
AT3G28910 MYB30, ATMYB30 myb domain protein 30 0.01 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.01 Archaeplastida
AT3G60460 DUO1 myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
AT3G62610 ATMYB11, PFG2, MYB11 myb domain protein 11 0.02 Archaeplastida
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.01 Archaeplastida
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.01 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.01 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01027811001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01033648001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01036633001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
Gb_01889 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_15814 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_25814 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g27090.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g48870.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g37690.1 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_1201g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_12445g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_137934g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_158099g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_1589g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_51173g0010 No alias transcription factor (MYB) 0.12 Archaeplastida
MA_8206949g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
Mp4g21790.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c13_8880V3.1 No alias myb domain protein 4r1 0.02 Archaeplastida
Pp3c15_7790V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c9_10290V3.1 No alias myb domain protein 55 0.05 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g093890.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc07g052300.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g053230.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g005890.3.1 No alias Transcription factor MYB101 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e009453_P002 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e013910_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e023024_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e026250_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e030314_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e031496_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e031799_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041055_P001 No alias transcription factor (MYB). transcriptional key... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 62
IPR001005 SANT/Myb 71 111
No external refs found!