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  5. LOC_Os01g49770.1

LOC_Os01g49770.1


Description : E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana (sp|o49500|mbr2_arath : 126.0)


Gene families : OG0000125 (Archaeplastida) Phylogenetic Tree(s): OG0000125_tree ,
OG_05_0000151 (LandPlants) Phylogenetic Tree(s): OG_05_0000151_tree ,
OG_06_0000175 (SeedPlants) Phylogenetic Tree(s): OG_06_0000175_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g49770.1
Cluster HCCA: Cluster_319

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00246320 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AMTR_s00046p00058640 evm_27.TU.AmTr_v1... Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 Archaeplastida
AT3G15070 No alias RING/U-box superfamily protein 0.05 Archaeplastida
GSVIVT01022103001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01022106001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc03g118840.3.1 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.05 Archaeplastida
Zm00001e013125_P002 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.03 Archaeplastida
Zm00001e032327_P003 No alias Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.04 Archaeplastida
Zm00001e036646_P001 No alias E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 153 195
No external refs found!