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  5. LOC_Os01g50040.1

LOC_Os01g50040.1


Description : no description available(sp|q65xs5|bc10_orysj : 323.0)


Gene families : OG0000189 (Archaeplastida) Phylogenetic Tree(s): OG0000189_tree ,
OG_05_0002361 (LandPlants) Phylogenetic Tree(s): OG_05_0002361_tree ,
OG_06_0003196 (SeedPlants) Phylogenetic Tree(s): OG_06_0003196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g50040.1
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
AT1G73810 No alias Core-2/I-branching... 0.02 Archaeplastida
GSVIVT01010878001 No alias No description available 0.05 Archaeplastida
GSVIVT01012669001 No alias No description available 0.03 Archaeplastida
GSVIVT01035340001 No alias No description available 0.02 Archaeplastida
MA_19551g0010 No alias no description available(sp|q65xs5|bc10_orysj : 176.0) 0.03 Archaeplastida
Zm00001e005573_P001 No alias no description available(sp|q65xs5|bc10_orysj : 162.0) 0.03 Archaeplastida
Zm00001e029160_P001 No alias no description available(sp|q65xs5|bc10_orysj : 176.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 67 337
No external refs found!