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  5. AMTR_s00002p00208760

AMTR_s00002p00208760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.212

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3d component


Gene families : OG0004060 (Archaeplastida) Phylogenetic Tree(s): OG0004060_tree ,
OG_05_0004437 (LandPlants) Phylogenetic Tree(s): OG_05_0004437_tree ,
OG_06_0005004 (SeedPlants) Phylogenetic Tree(s): OG_06_0005004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00208760
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
MA_416125g0010 No alias Eukaryotic translation initiation factor 3 subunit D... 0.02 Archaeplastida
Zm00001e020233_P001 No alias component eIF3d of eIF3 mRNA-to-PIC binding complex 0.02 Archaeplastida
Zm00001e032448_P001 No alias component eIF3d of eIF3 mRNA-to-PIC binding complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006559 L-phenylalanine catabolic process IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007783 eIF3d 8 513
No external refs found!