LOC_Os01g51140.1


Description : transcription factor (bHLH)


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g51140.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00127480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.02 Archaeplastida
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.03 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.02 Archaeplastida
MA_100071g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_29186g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e020012_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 291 330
No external refs found!