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  5. LOC_Os01g51230.1

LOC_Os01g51230.1


Description : no hits & (original description: none)


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0000202 (LandPlants) Phylogenetic Tree(s): OG_05_0000202_tree ,
OG_06_0003915 (SeedPlants) Phylogenetic Tree(s): OG_06_0003915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g51230.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00247260 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.07 Archaeplastida
AMTR_s00053p00180370 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00109p00027450 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.06 Archaeplastida
AT1G17480 IQD7 IQ-domain 7 0.03 Archaeplastida
AT1G72670 iqd8 IQ-domain 8 0.07 Archaeplastida
AT2G33990 iqd9 IQ-domain 9 0.03 Archaeplastida
AT3G49260 iqd21 IQ-domain 21 0.02 Archaeplastida
GSVIVT01035382001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01038556001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_01817 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g44610.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g03190.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g38790.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g40850.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_19597g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8080485g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp3g23600.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp7g08970.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c14_22560V3.1 No alias IQ-domain 6 0.03 Archaeplastida
Pp3c21_11850V3.1 No alias IQ-domain 3 0.02 Archaeplastida
Pp3c22_12150V3.1 No alias IQ-domain 6 0.03 Archaeplastida
Pp3c4_3290V3.1 No alias IQ-domain 2 0.03 Archaeplastida
Smo441008 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo67789 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc03g121760.3.1 No alias no hits & (original description: none) 0.15 Archaeplastida
Solyc08g062940.4.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Zm00001e016563_P001 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e020006_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e021855_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e027583_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e029506_P001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!