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  5. LOC_Os01g51540.1

LOC_Os01g51540.1


Description : cytidine deaminase


Gene families : OG0003511 (Archaeplastida) Phylogenetic Tree(s): OG0003511_tree ,
OG_05_0003294 (LandPlants) Phylogenetic Tree(s): OG_05_0003294_tree ,
OG_06_0003056 (SeedPlants) Phylogenetic Tree(s): OG_06_0003056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g51540.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AT4G29570 No alias Cytidine/deoxycytidylate deaminase family protein 0.04 Archaeplastida
AT4G29580 No alias Cytidine/deoxycytidylate deaminase family protein 0.05 Archaeplastida
AT4G29620 No alias Cytidine/deoxycytidylate deaminase family protein 0.03 Archaeplastida
AT4G29630 No alias Cytidine/deoxycytidylate deaminase family protein 0.04 Archaeplastida
AT4G29640 No alias Cytidine/deoxycytidylate deaminase family protein 0.05 Archaeplastida
AT4G29650 No alias Cytidine/deoxycytidylate deaminase family protein 0.03 Archaeplastida
LOC_Os06g40910.1 No alias cytidine deaminase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
BP GO:0009972 cytidine deamination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009092 homoserine metabolic process IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0019346 transsulfuration IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0050667 homocysteine metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR002125 CMP_dCMP_dom 51 131
IPR013171 Cyd/dCyd_deaminase_Zn-bd 157 290
No external refs found!