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LOC_Os01g52110.1


Description : Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza sativa subsp. japonica (sp|q5jl96|zfp34_orysj : 525.0)


Gene families : OG0001478 (Archaeplastida) Phylogenetic Tree(s): OG0001478_tree ,
OG_05_0001122 (LandPlants) Phylogenetic Tree(s): OG_05_0001122_tree ,
OG_06_0000963 (SeedPlants) Phylogenetic Tree(s): OG_06_0000963_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g52110.1
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00024480 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01033674001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_08580 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR008913 Znf_CHY 61 142
IPR001841 Znf_RING 196 239
No external refs found!