1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g52190.1

LOC_Os01g52190.1


Description : pepsin-type protease


Gene families : OG0000010 (Archaeplastida) Phylogenetic Tree(s): OG0000010_tree ,
OG_05_0027568 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0025767 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g52190.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT1G44130 No alias Eukaryotic aspartyl protease family protein 0.02 Archaeplastida
GSVIVT01011932001 No alias Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
LOC_Os01g08330.1 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os05g09530.1 No alias pepsin-type protease 0.04 Archaeplastida
MA_52634g0010 No alias pepsin-type protease 0.02 Archaeplastida
MA_9097701g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp3g05040.1 No alias pepsin-type protease 0.02 Archaeplastida
Mp6g05980.1 No alias pepsin-type protease 0.02 Archaeplastida
Solyc10g044740.2.1 No alias pepsin-type protease 0.02 Archaeplastida
Zm00001e015674_P001 No alias pepsin-type protease 0.02 Archaeplastida
Zm00001e015678_P001 No alias pepsin-type protease 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR032861 TAXi_N 86 256
IPR032799 TAXi_C 279 440
No external refs found!