LOC_Os01g52230.1


Description : phosphocholine phosphatase


Gene families : OG0001082 (Archaeplastida) Phylogenetic Tree(s): OG0001082_tree ,
OG_05_0001163 (LandPlants) Phylogenetic Tree(s): OG_05_0001163_tree ,
OG_06_0000832 (SeedPlants) Phylogenetic Tree(s): OG_06_0000832_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g52230.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT1G73010 ATPS2, PS2 phosphate starvation-induced gene 2 0.07 Archaeplastida
GSVIVT01015231001 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.03 Archaeplastida
GSVIVT01016881001 No alias Inorganic pyrophosphatase 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01016883001 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.02 Archaeplastida
Gb_34426 No alias phosphocholine phosphatase 0.03 Archaeplastida
MA_11734g0010 No alias phosphocholine phosphatase 0.02 Archaeplastida
MA_9506636g0010 No alias phosphocholine phosphatase 0.02 Archaeplastida
Solyc06g062540.3.1 No alias phosphocholine phosphatase 0.06 Archaeplastida
Solyc06g062550.4.1 No alias phosphocholine phosphatase 0.06 Archaeplastida
Solyc06g062560.2.1 No alias phosphocholine phosphatase 0.06 Archaeplastida
Zm00001e019951_P001 No alias phosphocholine phosphatase 0.07 Archaeplastida
Zm00001e020623_P006 No alias phosphocholine phosphatase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016791 phosphatase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003872 6-phosphofructokinase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR016965 Pase_PHOSPHO-typ 4 237
No external refs found!