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  5. LOC_Os01g52740.1

LOC_Os01g52740.1


Description : no hits & (original description: none)


Gene families : OG0000280 (Archaeplastida) Phylogenetic Tree(s): OG0000280_tree ,
OG_05_0027570 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0025769 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g52740.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT1G11700 No alias Protein of unknown function, DUF584 0.03 Archaeplastida
AT2G28400 No alias Protein of unknown function, DUF584 0.03 Archaeplastida
AT4G18980 AtS40-3 AtS40-3 0.06 Archaeplastida
AT4G21930 No alias Protein of unknown function, DUF584 0.03 Archaeplastida
AT5G03230 No alias Protein of unknown function, DUF584 0.02 Archaeplastida
GSVIVT01025190001 No alias No description available 0.03 Archaeplastida
GSVIVT01025684001 No alias No description available 0.03 Archaeplastida
LOC_Os07g33270.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_19374g0040 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_2588g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_441447g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5080831g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_54260g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_63850g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c24_6800V3.1 No alias Protein of unknown function, DUF584 0.02 Archaeplastida
Solyc07g064650.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g007790.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e012668_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015167_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e027469_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e035102_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e039388_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041249_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006559 L-phenylalanine catabolic process IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009074 aromatic amino acid family catabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 19 103
No external refs found!