LOC_Os01g53220.1


Description : transcription factor (HSF)


Gene families : OG0000090 (Archaeplastida) Phylogenetic Tree(s): OG0000090_tree ,
OG_05_0021303 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0020557 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g53220.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g13800.1 No alias transcription factor (HSF) 0.01 Archaeplastida
MA_8992661g0010 No alias transcription factor (HSF) 0.02 Archaeplastida
MA_9434330g0010 No alias transcription factor (HSF) 0.01 Archaeplastida
Solyc02g072060.3.1 No alias transcription factor (HSF) 0.01 Archaeplastida
Solyc03g026020.3.1 No alias transcription factor (HSF) 0.02 Archaeplastida
Solyc07g040680.3.1 No alias transcription factor (HSF) 0.01 Archaeplastida
Solyc10g079380.2.1 No alias transcription factor (HSF) 0.04 Archaeplastida
Solyc11g064990.2.1 No alias transcription factor (HSF) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 25 114
No external refs found!