Description : pectin methylesterase
Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0000108 (LandPlants) Phylogenetic Tree(s): OG_05_0000108_tree ,
OG_06_0001404 (SeedPlants) Phylogenetic Tree(s): OG_06_0001404_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os01g53990.1 | |
Cluster | HCCA: Cluster_229 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00264370 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.02 | Archaeplastida | |
AT1G05310 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT2G36710 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT5G19730 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
GSVIVT01015852001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
MA_14449g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
MA_6780346g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Pp3c16_6660V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c18_13190V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c1_6010V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c3_32350V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c3_35040V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c8_1440V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c8_1680V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c8_2010V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Smo81583 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
Solyc01g109740.3.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
Zm00001e035522_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
BP | GO:0042545 | cell wall modification | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
MF | GO:0005507 | copper ion binding | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | Neighborhood |
MF | GO:0008417 | fucosyltransferase activity | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0040008 | regulation of growth | IEP | Neighborhood |
BP | GO:0042546 | cell wall biogenesis | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
BP | GO:0045927 | positive regulation of growth | IEP | Neighborhood |
BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000070 | Pectinesterase_cat | 93 | 378 |
No external refs found! |