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  5. LOC_Os01g54300.1

LOC_Os01g54300.1


Description : endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0002581 (SeedPlants) Phylogenetic Tree(s): OG_06_0002581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g54300.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Gb_08848 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_28909 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_30579 No alias endo-beta-1,4-mannanase 0.01 Archaeplastida
LOC_Os06g20620.1 No alias endo-beta-1,4-mannanase 0.06 Archaeplastida
MA_10358593g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_10433157g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_10436185g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.01 Archaeplastida
MA_111906g0010 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
MA_38956g0010 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
MA_6558g0010 No alias endo-beta-1,4-mannanase 0.01 Archaeplastida
MA_71720g0010 No alias endo-beta-1,4-mannanase 0.01 Archaeplastida
MA_8194133g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.02 Archaeplastida
Smo101148 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.01 Archaeplastida
Smo101525 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.05 Archaeplastida
Solyc04g080620.3.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Solyc07g053920.3.1 No alias endo-beta-1,4-mannanase 0.01 Archaeplastida
Zm00001e019799_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e029246_P001 No alias endo-beta-1,4-mannanase 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 82 357
No external refs found!