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  5. LOC_Os01g54340.1

LOC_Os01g54340.1


Description : no hits & (original description: none)


Gene families : OG0000196 (Archaeplastida) Phylogenetic Tree(s): OG0000196_tree ,
OG_05_0000095 (LandPlants) Phylogenetic Tree(s): OG_05_0000095_tree ,
OG_06_0006258 (SeedPlants) Phylogenetic Tree(s): OG_06_0006258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g54340.1
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00020p00161780 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT2G39650 No alias Protein of unknown function (DUF506) 0.08 Archaeplastida
AT3G07350 No alias Protein of unknown function (DUF506) 0.03 Archaeplastida
AT4G32480 No alias Protein of unknown function (DUF506) 0.04 Archaeplastida
GSVIVT01006248001 No alias No description available 0.03 Archaeplastida
GSVIVT01030534001 No alias No description available 0.02 Archaeplastida
LOC_Os01g74250.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g06680.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os03g58230.1 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os11g25020.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10117499g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp5g23920.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g005480.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e011452_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e018858_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019800_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032942_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 12 232
No external refs found!