LOC_Os01g55440.1

Description : SNF1-related protein kinase (SnRK3)

Gene families : OG0000072 (Archaeplastida) Phylogenetic Tree(s): OG0000072_tree ,
OG_05_0000211 (LandPlants) Phylogenetic Tree(s): OG_05_0000211_tree ,
OG_06_0000077 (SeedPlants) Phylogenetic Tree(s): OG_06_0000077_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g55440.1
Cluster	HCCA: Cluster_122

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00018p00244280	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.CAMK kinase...	0.01	Archaeplastida
AMTR_s00045p00096970	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.CAMK kinase...	0.02	Archaeplastida
AMTR_s00130p00110630	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.CAMK kinase...	0.16	Archaeplastida
AT1G30270	SnRK3.23,...	CBL-interacting protein kinase 23	0.05	Archaeplastida
AT4G14580	SnRK3.3, CIPK4	CBL-interacting protein kinase 4	0.02	Archaeplastida
AT4G24400	ATCIPK8, CIPK8,...	CBL-interacting protein kinase 8	0.02	Archaeplastida
AT5G25110	SnRK3.25, CIPK25	CBL-interacting protein kinase 25	0.02	Archaeplastida
AT5G45810	CIPK19, SnRK3.5	CBL-interacting protein kinase 19	0.06	Archaeplastida
Cpa\|evm.model.tig00020960.6	No alias	Enzyme classification.EC_2 transferases.EC_2.7...	0.01	Archaeplastida
GSVIVT01021231001	No alias	Protein modification.phosphorylation.CAMK kinase...	0.01	Archaeplastida
GSVIVT01032708001	No alias	CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica	0.04	Archaeplastida
Gb_16900	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
Gb_28009	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
Gb_31411	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
LOC_Os05g11790.1	No alias	SNF1-related protein kinase (SnRK3)	0.09	Archaeplastida
LOC_Os07g48760.1	No alias	SNF1-related protein kinase (SnRK3)	0.01	Archaeplastida
MA_10430528g0010	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
MA_599566g0010	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
MA_61508g0010	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
Solyc02g072540.3.1	No alias	SNF1-related protein kinase (SnRK3)	0.06	Archaeplastida
Solyc03g006110.3.1	No alias	No annotation	0.15	Archaeplastida
Solyc05g052270.3.1	No alias	SNF1-related protein kinase (SnRK3)	0.05	Archaeplastida
Solyc06g007440.4.1	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Solyc07g005440.1.1	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
Solyc09g018280.1.1	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Solyc10g085450.3.1	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Zm00001e022467_P001	No alias	SNF1-related protein kinase (SnRK3)	0.04	Archaeplastida
Zm00001e026022_P001	No alias	SNF1-related protein kinase (SnRK3)	0.08	Archaeplastida
Zm00001e027413_P002	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Zm00001e029014_P003	No alias	SNF1-related protein kinase (SnRK3)	0.18	Archaeplastida
Zm00001e032813_P002	No alias	SNF1-related protein kinase (SnRK3)	0.02	Archaeplastida
Zm00001e035912_P001	No alias	SNF1-related protein kinase (SnRK3)	0.03	Archaeplastida
Zm00001e037422_P004	No alias	SNF1-related protein kinase (SnRK3). protein kinase (SOS2)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
BP	GO:0010274	hydrotropism	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016161	beta-amylase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Neighborhood
MF	GO:0016843	amine-lyase activity	IEP	Neighborhood
MF	GO:0016844	strictosidine synthase activity	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030570	pectate lyase activity	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	17	272
IPR004041	NAF_dom	331	387

External Links

No external refs found!

LOC_Os01g55440.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation