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  5. LOC_Os01g55500.1

LOC_Os01g55500.1


Description : solute transporter (NAT)


Gene families : OG0000268 (Archaeplastida) Phylogenetic Tree(s): OG0000268_tree ,
OG_05_0000453 (LandPlants) Phylogenetic Tree(s): OG_05_0000453_tree ,
OG_06_0001830 (SeedPlants) Phylogenetic Tree(s): OG_06_0001830_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55500.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00102240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
AMTR_s00151p00089770 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
AT2G27810 ATNAT12, NAT12 nucleobase-ascorbate transporter 12 0.03 Archaeplastida
Solyc02g072500.3.1 No alias solute transporter (NAT) 0.04 Archaeplastida
Solyc07g049320.4.1 No alias solute transporter (NAT) 0.02 Archaeplastida
Zm00001e006213_P001 No alias solute transporter (NAT) 0.06 Archaeplastida
Zm00001e009683_P001 No alias solute transporter (NAT) 0.05 Archaeplastida
Zm00001e021544_P001 No alias solute transporter (NAT) 0.04 Archaeplastida
Zm00001e028701_P001 No alias solute transporter (NAT) 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006043 Xant/urac/vitC 32 435
No external refs found!