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  5. LOC_Os01g55570.1

LOC_Os01g55570.1


Description : no hits & (original description: none)


Gene families : OG0000711 (Archaeplastida) Phylogenetic Tree(s): OG0000711_tree ,
OG_05_0002739 (LandPlants) Phylogenetic Tree(s): OG_05_0002739_tree ,
OG_06_0003149 (SeedPlants) Phylogenetic Tree(s): OG_06_0003149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55570.1
Cluster HCCA: Cluster_321

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272260 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.07 Archaeplastida
AMTR_s00038p00072170 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.09 Archaeplastida
AMTR_s00135p00058090 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.02 Archaeplastida
AT1G52220 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.14 Archaeplastida
AT2G46820 PTAC8, TMP14, PSI-P, PSAP photosystem I P subunit 0.24 Archaeplastida
AT4G01150 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.11 Archaeplastida
Cpa|evm.model.tig00000849.28 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00000900.28 No alias No description available 0.04 Archaeplastida
GSVIVT01017074001 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.03 Archaeplastida
GSVIVT01027036001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.05 Archaeplastida
GSVIVT01027447001 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.14 Archaeplastida
GSVIVT01028749001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.05 Archaeplastida
Gb_09245 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
MA_210976g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.02 Archaeplastida
MA_60075g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.06 Archaeplastida
MA_734271g0010 No alias no hits & (original description: none) 0.1 Archaeplastida
MA_904218g0010 No alias no hits & (original description: none) 0.12 Archaeplastida
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.16 Archaeplastida
Mp6g20800.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.15 Archaeplastida
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.19 Archaeplastida
Pp3c16_11960V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c17_14680V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c17_14681V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c20_4990V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c23_20770V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c8_17810V3.1 No alias No annotation 0.01 Archaeplastida
Smo49217 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.04 Archaeplastida
Solyc01g095430.3.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.17 Archaeplastida
Solyc06g066620.4.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.09 Archaeplastida
Solyc10g005050.3.1 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.17 Archaeplastida
Solyc10g011770.4.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.08 Archaeplastida
Solyc11g010480.2.1 No alias Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.07 Archaeplastida
Zm00001e000193_P001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.09 Archaeplastida
Zm00001e002212_P002 No alias Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.08 Archaeplastida
Zm00001e023473_P001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.16 Archaeplastida
Zm00001e023828_P001 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e029009_P001 No alias no hits & (original description: none) 0.15 Archaeplastida
Zm00001e030948_P002 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.12 Archaeplastida
Zm00001e034870_P002 No alias no hits & (original description: none) 0.17 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006817 phosphate ion transport IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0010242 oxygen evolving activity IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025564 CAAD_dom 66 150
No external refs found!