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  5. LOC_Os01g55690.1

LOC_Os01g55690.1


Description : Glutelin type-A 1 OS=Oryza sativa subsp. japonica (sp|p07728|glua1_orysj : 911.0)


Gene families : OG0001123 (Archaeplastida) Phylogenetic Tree(s): OG0001123_tree ,
OG_05_0000617 (LandPlants) Phylogenetic Tree(s): OG_05_0000617_tree ,
OG_06_0000316 (SeedPlants) Phylogenetic Tree(s): OG_06_0000316_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55690.1
Cluster HCCA: Cluster_361

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01028338001 No alias 11S globulin subunit beta OS=Cucurbita maxima 0.02 Archaeplastida
GSVIVT01028341001 No alias 11S globulin subunit beta OS=Cucurbita maxima 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 52 210
IPR006045 Cupin_1 320 467
No external refs found!