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  5. LOC_Os01g57720.1

LOC_Os01g57720.1


Description : component ATG18 of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG0002452 (Archaeplastida) Phylogenetic Tree(s): OG0002452_tree ,
OG_05_0001770 (LandPlants) Phylogenetic Tree(s): OG_05_0001770_tree ,
OG_06_0001756 (SeedPlants) Phylogenetic Tree(s): OG_06_0001756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g57720.1
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00257260 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 Archaeplastida
AT1G54710 ATG18H, ATATG18H homolog of yeast autophagy 18 (ATG18) H 0.02 Archaeplastida
AT5G54730 ATATG18F, G18F, ATG18F homolog of yeast autophagy 18 (ATG18) F 0.02 Archaeplastida
GSVIVT01011044001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 Archaeplastida
Gb_30797 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida
Gb_33419 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Mp3g05770.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.01 Archaeplastida
Solyc01g098430.3.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.09 Archaeplastida
Zm00001e019603_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Zm00001e027088_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Zm00001e031636_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
InterPro domains Description Start Stop
IPR022175 BCAS3 514 752
No external refs found!