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  5. LOC_Os01g57870.1

LOC_Os01g57870.1


Description : Disease resistance protein RPS2 OS=Arabidopsis thaliana (sp|q42484|rps2_arath : 468.0)


Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g57870.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00245910 evm_27.TU.AmTr_v1... Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00009p00261740 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00019p00088510 evm_27.TU.AmTr_v1... No description available 0.08 Archaeplastida
AMTR_s00050p00210650 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g63350... 0.07 Archaeplastida
AMTR_s00062p00106420 evm_27.TU.AmTr_v1... Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00062p00146080 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00071p00163290 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.04 Archaeplastida
AMTR_s00071p00163330 evm_27.TU.AmTr_v1... Probable disease resistance protein At5g63020... 0.03 Archaeplastida
AMTR_s00078p00177570 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00099p00016360 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00142p00041790 evm_27.TU.AmTr_v1... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G12210 RFL1 RPS5-like 1 0.03 Archaeplastida
AT1G12220 RPS5 Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT1G12280 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Archaeplastida
AT1G12290 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
AT1G15890 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
AT1G61190 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Archaeplastida
AT1G61310 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Archaeplastida
AT1G63350 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Archaeplastida
AT4G26090 RPS2 NB-ARC domain-containing disease resistance protein 0.02 Archaeplastida
AT5G43730 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 Archaeplastida
AT5G43740 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Archaeplastida
GSVIVT01014595001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.08 Archaeplastida
GSVIVT01017142001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01017232001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01038391001 No alias Probable disease resistance protein At1g12290... 0.04 Archaeplastida
Gb_12853 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Gb_12854 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_22529 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10265639g0010 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10436967g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_162415g0010 No alias Probable disease resistance protein At1g61310... 0.06 Archaeplastida
MA_23524g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_5730007g0010 No alias Disease resistance protein RFL1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_733g0010 No alias Probable disease resistance protein At1g15890... 0.02 Archaeplastida
MA_781140g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_834155g0010 No alias no hits & (original description: none) 0.11 Archaeplastida
MA_90078g0010 No alias Disease resistance protein RPS5 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_9010869g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_91246g0010 No alias Probable disease resistance protein At1g61190... 0.02 Archaeplastida
Solyc08g007250.3.1 No alias Disease resistance protein At4g27190 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e019599_P001 No alias Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 529 588
IPR002182 NB-ARC 153 373
No external refs found!