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  5. LOC_Os01g58022.1

LOC_Os01g58022.1


Description : component NdhK of NDH subcomplex A


Gene families : OG0003878 (Archaeplastida) Phylogenetic Tree(s): OG0003878_tree ,
OG_05_0002828 (LandPlants) Phylogenetic Tree(s): OG_05_0002828_tree ,
OG_06_0003618 (SeedPlants) Phylogenetic Tree(s): OG_06_0003618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g58022.1
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00107760 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.05 Archaeplastida
ATCG00430 PSBG photosystem II reaction center protein G 0.26 Archaeplastida
Gb_14100 No alias NAD(P)H-quinone oxidoreductase subunit K, chloroplastic... 0.05 Archaeplastida
Gb_18611 No alias component NdhK of NDH subcomplex A 0.05 Archaeplastida
Gb_28626 No alias component NdhK of NDH subcomplex A 0.04 Archaeplastida
LOC_Os12g19420.1 No alias NAD(P)H-quinone oxidoreductase subunit K, chloroplastic... 0.03 Archaeplastida
Solyc00g500062.1.1 No alias component NdhK of NDH subcomplex A 0.09 Archaeplastida
Solyc00g500141.1.1 No alias NAD(P)H-quinone oxidoreductase subunit K, chloroplastic... 0.06 Archaeplastida
Zm00001e003896_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e003899_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e017818_P001 No alias No annotation 0.04 Archaeplastida
Zm00001e042032_P001 No alias component NdhK of NDH subcomplex A 0.12 Archaeplastida
Zm00001e042053_P001 No alias component NdhK of NDH subcomplex A 0.07 Archaeplastida
Zm00001e042079_P001 No alias component NdhK of NDH subcomplex A 0.12 Archaeplastida
Zm00001e042097_P001 No alias component NdhK of NDH subcomplex A 0.12 Archaeplastida
Zm00001e042149_P001 No alias component NdhK of NDH subcomplex A 0.12 Archaeplastida
Zm00001e042352_P001 No alias component NdhK of NDH subcomplex A 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006137 NADH_UbQ_OxRdtase-like_20kDa 44 153
No external refs found!