LOC_Os01g58550.1

Description : no hits & (original description: none)

Gene families : OG0001195 (Archaeplastida) Phylogenetic Tree(s): OG0001195_tree ,
OG_05_0000753 (LandPlants) Phylogenetic Tree(s): OG_05_0000753_tree ,
OG_06_0006750 (SeedPlants) Phylogenetic Tree(s): OG_06_0006750_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g58550.1
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00251960	evm_27.TU.AmTr_v1...	No description available	0.06	Archaeplastida
AMTR_s00032p00209300	evm_27.TU.AmTr_v1...	No description available	0.07	Archaeplastida
AMTR_s00065p00208780	evm_27.TU.AmTr_v1...	No description available	0.05	Archaeplastida
AT1G13635	No alias	DNA glycosylase superfamily protein	0.09	Archaeplastida
AT3G12710	No alias	DNA glycosylase superfamily protein	0.04	Archaeplastida
AT5G44680	No alias	DNA glycosylase superfamily protein	0.07	Archaeplastida
GSVIVT01009657001	No alias	No description available	0.01	Archaeplastida
GSVIVT01010060001	No alias	No description available	0.04	Archaeplastida
GSVIVT01010109001	No alias	No description available	0.05	Archaeplastida
GSVIVT01023602001	No alias	No description available	0.03	Archaeplastida
LOC_Os06g44050.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os08g38170.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
LOC_Os09g25290.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_114043g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_319186g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc02g082120.3.1	No alias	no hits & (original description: none)	0.06	Archaeplastida
Solyc05g010800.3.1	No alias	no hits & (original description: none)	0.06	Archaeplastida
Solyc10g005210.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc12g010050.2.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e003412_P001	No alias	no hits & (original description: none)	0.07	Archaeplastida
Zm00001e009836_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e019556_P001	No alias	no hits & (original description: none)	0.01	Archaeplastida
Zm00001e028917_P002	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e030438_P002	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e034160_P002	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e041165_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003905	alkylbase DNA N-glycosylase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006284	base-excision repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	None	Extended
MF	GO:0019104	DNA N-glycosylase activity	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043733	DNA-3-methylbase glycosylase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Neighborhood
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005484	SNAP receptor activity	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	IEP	Neighborhood
BP	GO:0009606	tropism	IEP	Neighborhood
BP	GO:0010274	hydrotropism	IEP	Neighborhood
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015020	glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017048	Rho GTPase binding	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0046658	anchored component of plasma membrane	IEP	Neighborhood
MF	GO:0051087	chaperone binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005019	Adenine_glyco	212	382

External Links

No external refs found!

LOC_Os01g58550.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation