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  5. LOC_Os01g59730.1

LOC_Os01g59730.1


Description : component RPL30 of LSU proteome component


Gene families : OG0002142 (Archaeplastida) Phylogenetic Tree(s): OG0002142_tree ,
OG_05_0001948 (LandPlants) Phylogenetic Tree(s): OG_05_0001948_tree ,
OG_06_0002467 (SeedPlants) Phylogenetic Tree(s): OG_06_0002467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g59730.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT1G77940 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.04 Archaeplastida
AT3G18740 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.07 Archaeplastida
Cpa|evm.model.tig00001164.6 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
Cre10.g420750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
GSVIVT01022191001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
GSVIVT01032102001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Gb_02409 No alias component RPL30 of LSU proteome component 0.06 Archaeplastida
Gb_13527 No alias component RPL30 of LSU proteome component 0.03 Archaeplastida
LOC_Os01g16890.1 No alias component RPL30 of LSU proteome component 0.05 Archaeplastida
LOC_Os05g41110.1 No alias component RPL30 of LSU proteome component 0.04 Archaeplastida
MA_6354g0010 No alias component RPL30 of LSU proteome component 0.04 Archaeplastida
Mp7g01690.1 No alias component RPL30 of LSU proteome component 0.07 Archaeplastida
Pp3c12_9290V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.04 Archaeplastida
Pp3c16_10400V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.06 Archaeplastida
Pp3c25_9320V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 Archaeplastida
Pp3c4_15480V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.06 Archaeplastida
Pp3c5_4330V3.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.07 Archaeplastida
Smo19071 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
Solyc01g009100.4.1 No alias component RPL30 of LSU proteome component 0.06 Archaeplastida
Solyc04g072660.4.1 No alias component RPL30 of LSU proteome component 0.07 Archaeplastida
Solyc11g071490.2.1 No alias component RPL30 of LSU proteome component 0.03 Archaeplastida
Zm00001e031987_P001 No alias component RPL30 of LSU proteome component 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 14 104
No external refs found!