LOC_Os01g60250.1


Description : Pentatricopeptide repeat-containing protein At3g14730 OS=Arabidopsis thaliana (sp|q9luc2|pp231_arath : 371.0)


Gene families : OG0011611 (Archaeplastida) Phylogenetic Tree(s): OG0011611_tree ,
OG_05_0018340 (LandPlants) Phylogenetic Tree(s): OG_05_0018340_tree ,
OG_06_0017964 (SeedPlants) Phylogenetic Tree(s): OG_06_0017964_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g60250.1
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018393001 No alias Pentatricopeptide repeat-containing protein At1g09410,... 0.06 Archaeplastida
Zm00001e019460_P001 No alias Pentatricopeptide repeat-containing protein At3g14730... 0.04 Archaeplastida
Zm00001e030731_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 518 544
IPR002885 Pentatricopeptide_repeat 419 441
IPR002885 Pentatricopeptide_repeat 240 264
IPR002885 Pentatricopeptide_repeat 140 166
IPR002885 Pentatricopeptide_repeat 168 197
IPR002885 Pentatricopeptide_repeat 375 415
No external refs found!