AMTR_s00002p00240250 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.297

Description : Cell wall.cellulose.synthesis.cellulose synthase complex (CSC).CSC components.CesA-type catalytic component

Gene families : OG0000303 (Archaeplastida) Phylogenetic Tree(s): OG0000303_tree ,
OG_05_0000193 (LandPlants) Phylogenetic Tree(s): OG_05_0000193_tree ,
OG_06_0000126 (SeedPlants) Phylogenetic Tree(s): OG_06_0000126_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00002p00240250
Cluster	HCCA: Cluster_254

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00196920	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	Archaeplastida
AMTR_s00137p00043990	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	Archaeplastida
GSVIVT01013471001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	Archaeplastida
GSVIVT01034552001	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	Archaeplastida
LOC_Os05g08370.1	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
LOC_Os07g10770.1	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
LOC_Os07g24190.1	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
MA_140410g0010	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Smo141535	No alias	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	Archaeplastida
Zm00001e004630_P001	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Zm00001e009406_P001	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Zm00001e009570_P001	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e009843_P002	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e019828_P001	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e026711_P001	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e031187_P001	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Zm00001e033093_P003	No alias	catalytic component CesA of cellulose synthase complex	0.02	Archaeplastida
Zm00001e033234_P001	No alias	No annotation	0.02	Archaeplastida
Zm00001e033375_P001	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida
Zm00001e034187_P001	No alias	catalytic component CesA of cellulose synthase complex	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0008080	N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0016407	acetyltransferase activity	IEP	Neighborhood
MF	GO:0016410	N-acyltransferase activity	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	142	685

External Links

No external refs found!

AMTR_s00002p00240250 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation