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  5. LOC_Os01g61250.1

LOC_Os01g61250.1


Description : Probable methyltransferase PMT23 OS=Arabidopsis thaliana (sp|q9siz3|pmtn_arath : 712.0)


Gene families : OG0001029 (Archaeplastida) Phylogenetic Tree(s): OG0001029_tree ,
OG_05_0000619 (LandPlants) Phylogenetic Tree(s): OG_05_0000619_tree ,
OG_06_0006909 (SeedPlants) Phylogenetic Tree(s): OG_06_0006909_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g61250.1
Cluster HCCA: Cluster_357

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00185010 evm_27.TU.AmTr_v1... Probable methyltransferase PMT27 OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e008978_P001 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e019404_P003 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 163 655
No external refs found!