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  5. LOC_Os01g61830.1

LOC_Os01g61830.1


Description : C3H zinc finger transcription factor


Gene families : OG0006263 (Archaeplastida) Phylogenetic Tree(s): OG0006263_tree ,
OG_05_0007634 (LandPlants) Phylogenetic Tree(s): OG_05_0007634_tree ,
OG_06_0009343 (SeedPlants) Phylogenetic Tree(s): OG_06_0009343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g61830.1
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016357001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.05 Archaeplastida
Mp3g25110.1 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
Zm00001e019376_P001 No alias C3H zinc finger transcription factor 0.14 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR032378 ZC3H15/TMA46_C 217 296
No external refs found!