LOC_Os01g62190.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000107 (SeedPlants) Phylogenetic Tree(s): OG_06_0000107_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g62190.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00073930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT2G28710 No alias C2H2-type zinc finger family protein 0.04 Archaeplastida
AT3G60580 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
AT5G03510 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
AT5G59820 RHL41, ZAT12 C2H2-type zinc finger family protein 0.02 Archaeplastida
AT5G67450 AZF1, ZF1 zinc-finger protein 1 0.02 Archaeplastida
GSVIVT01023887001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01037364001 No alias Zinc finger protein ZAT2 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01037851001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Gb_01024 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_06483 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_06484 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_10419 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Gb_16419 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_23552 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_40151 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g17150.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os03g32220.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g60540.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os05g02390.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
LOC_Os08g20580.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_109421g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_119483g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_19127g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_5277601g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_584554g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_68331g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc01g090840.3.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc01g107170.2.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc05g054650.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc06g005180.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc06g060740.3.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc06g074800.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc12g088390.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e001253_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e002063_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e003057_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e006181_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e023172_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e028782_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e028784_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e035423_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e038072_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e038074_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e038464_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!