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  5. AMTR_s00002p00241480

AMTR_s00002p00241480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.307

Description : Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana


Gene families : OG0000106 (Archaeplastida) Phylogenetic Tree(s): OG0000106_tree ,
OG_05_0006062 (LandPlants) Phylogenetic Tree(s): OG_05_0006062_tree ,
OG_06_0005216 (SeedPlants) Phylogenetic Tree(s): OG_06_0005216_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00241480
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01033079001 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os04g42420.1 No alias anion transporter (Fabaceae-N70) 0.02 Archaeplastida
LOC_Os12g44180.1 No alias anion transporter (Fabaceae-N70) 0.03 Archaeplastida
Solyc03g019650.3.1 No alias anion transporter (Fabaceae-N70) 0.03 Archaeplastida
Zm00001e006026_P001 No alias anion transporter (Fabaceae-N70) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005342 organic acid transmembrane transporter activity IEP Neighborhood
MF GO:0005343 organic acid:sodium symporter activity IEP Neighborhood
BP GO:0006144 purine nucleobase metabolic process IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006814 sodium ion transport IEP Neighborhood
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008508 bile acid:sodium symporter activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009113 purine nucleobase biosynthetic process IEP Neighborhood
MF GO:0015081 sodium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015125 bile acid transmembrane transporter activity IEP Neighborhood
MF GO:0015293 symporter activity IEP Neighborhood
MF GO:0015294 solute:cation symporter activity IEP Neighborhood
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP Neighborhood
MF GO:0015370 solute:sodium symporter activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
MF GO:0140161 monocarboxylate:sodium symporter activity IEP Neighborhood
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR010658 Nodulin-like 18 263
IPR011701 MFS 342 533
No external refs found!