1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g63460.1

LOC_Os01g63460.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000498 (LandPlants) Phylogenetic Tree(s): OG_05_0000498_tree ,
OG_06_0000376 (SeedPlants) Phylogenetic Tree(s): OG_06_0000376_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g63460.1
Cluster HCCA: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00022290 evm_27.TU.AmTr_v1... Transcription factor SRM1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT4G36570 ATRL3, RL3 RAD-like 3 0.02 Archaeplastida
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT5G47390 No alias myb-like transcription factor family protein 0.05 Archaeplastida
GSVIVT01005816001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01024794001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01034001001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035363001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Gb_08692 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g09640.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os01g44390.2 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g64360.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_10432538g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_40234g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_41041g0010 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_413315g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_908g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_9437011g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_957399g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Mp5g11830.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Pp3c15_23110V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Pp3c4_17230V3.1 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
Smo84280 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Solyc03g113620.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc04g005100.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc05g013430.1.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc07g026680.2.1 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Solyc08g078340.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e016939_P001 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.07 Archaeplastida
Zm00001e025784_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 138 182
No external refs found!