LOC_Os01g64360.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0010252 (LandPlants) Phylogenetic Tree(s): OG_05_0010252_tree ,
OG_06_0005097 (SeedPlants) Phylogenetic Tree(s): OG_06_0005097_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g64360.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00022290 evm_27.TU.AmTr_v1... Transcription factor SRM1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00074p00097250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G74840 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G11280 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G36570 ATRL3, RL3 RAD-like 3 0.05 Archaeplastida
AT5G04760 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.08 Archaeplastida
Cpa|evm.model.tig00000455.6 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01009723001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01016996001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01024794001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01034001001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01036090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
LOC_Os01g09640.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os01g63460.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
LOC_Os05g37050.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_10432538g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_10432875g0030 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_17466g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_209399g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_40234g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_41041g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_413315g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_41803g0010 No alias transcription factor (MYB-related) 0.06 Archaeplastida
MA_7049680g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_957399g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Mp5g11830.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Pp3c15_23090V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Pp3c4_5410V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Smo133546 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc03g096350.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc04g005100.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc04g008870.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc04g080500.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc05g013430.1.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc05g052610.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc08g065380.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc09g014250.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc11g006720.2.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc11g071500.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc12g089170.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e025446_P001 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Zm00001e025784_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e027835_P005 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e028003_P001 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Zm00001e031755_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 106 150
No external refs found!