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  5. LOC_Os01g64590.1

LOC_Os01g64590.1


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0009080 (SeedPlants) Phylogenetic Tree(s): OG_06_0009080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g64590.1
Cluster HCCA: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00213350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT3G55370 OBP3 OBF-binding protein 3 0.06 Archaeplastida
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01007758001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01034189001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Gb_07805 No alias transcription factor (DOF) 0.03 Archaeplastida
Gb_09675 No alias transcription factor (DOF) 0.03 Archaeplastida
Gb_20144 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os03g07360.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc02g076850.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Solyc03g112930.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e023334_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e027411_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e032133_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e041444_P001 No alias transcription factor (DOF) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 24 79
No external refs found!