LOC_Os01g65520.1

Description : regulatory factor (SUN3/4/5) nuclear shape determination

Gene families : OG0001774 (Archaeplastida) Phylogenetic Tree(s): OG0001774_tree ,
OG_05_0001622 (LandPlants) Phylogenetic Tree(s): OG_05_0001622_tree ,
OG_06_0002261 (SeedPlants) Phylogenetic Tree(s): OG_06_0002261_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g65520.1
Cluster	HCCA: Cluster_194

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT1G71360	No alias	Galactose-binding protein	0.03	Archaeplastida
GSVIVT01037194001	No alias	SUN domain-containing protein 3 OS=Arabidopsis thaliana	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
MF	GO:0008430	selenium binding	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0016579	protein deubiquitination	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0070646	protein modification by small protein removal	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR012919	SUN_dom	245	367

External Links

No external refs found!