LOC_Os01g66130.1

Description : U-box domain-containing protein 4 OS=Arabidopsis thaliana (sp|o22193|pub4_arath : 593.0)

Gene families : OG0002359 (Archaeplastida) Phylogenetic Tree(s): OG0002359_tree ,
OG_05_0001618 (LandPlants) Phylogenetic Tree(s): OG_05_0001618_tree ,
OG_06_0028421 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g66130.1
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT2G23140	No alias	RING/U-box superfamily protein with ARM repeat domain	0.02	Archaeplastida
Mp4g07620.1	No alias	U-box domain-containing protein 4 OS=Arabidopsis...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Neighborhood
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Neighborhood
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	Neighborhood
CC	GO:0030915	Smc5-Smc6 complex	IEP	Neighborhood
MF	GO:0034061	DNA polymerase activity	IEP	Neighborhood
MF	GO:0070403	NAD+ binding	IEP	Neighborhood
CC	GO:0106068	SUMO ligase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	224	294
IPR000225	Armadillo	544	581
IPR000225	Armadillo	626	663

External Links

No external refs found!