| BP | GO:0003002 | regionalization | IEP | Neighborhood |
| BP | GO:0003006 | developmental process involved in reproduction | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Neighborhood |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | IEP | Neighborhood |
| BP | GO:0007389 | pattern specification process | IEP | Neighborhood |
| MF | GO:0008134 | transcription factor binding | IEP | Neighborhood |
| MF | GO:0008146 | sulfotransferase activity | IEP | Neighborhood |
| MF | GO:0008810 | cellulase activity | IEP | Neighborhood |
| BP | GO:0009554 | megasporogenesis | IEP | Neighborhood |
| BP | GO:0009653 | anatomical structure morphogenesis | IEP | Neighborhood |
| BP | GO:0009799 | specification of symmetry | IEP | Neighborhood |
| BP | GO:0009855 | determination of bilateral symmetry | IEP | Neighborhood |
| BP | GO:0009888 | tissue development | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0009908 | flower development | IEP | Neighborhood |
| BP | GO:0009944 | polarity specification of adaxial/abaxial axis | IEP | Neighborhood |
| BP | GO:0010047 | fruit dehiscence | IEP | Neighborhood |
| BP | GO:0010051 | xylem and phloem pattern formation | IEP | Neighborhood |
| BP | GO:0010093 | specification of floral organ identity | IEP | Neighborhood |
| BP | GO:0010158 | abaxial cell fate specification | IEP | Neighborhood |
| BP | GO:0010160 | formation of animal organ boundary | IEP | Neighborhood |
| BP | GO:0010358 | leaf shaping | IEP | Neighborhood |
| BP | GO:0010417 | glucuronoxylan biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010500 | transmitting tissue development | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| CC | GO:0016324 | apical plasma membrane | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0031540 | regulation of anthocyanin biosynthetic process | IEP | Neighborhood |
| BP | GO:0032502 | developmental process | IEP | Neighborhood |
| BP | GO:0040034 | regulation of development, heterochronic | IEP | Neighborhood |
| BP | GO:0042127 | regulation of cell proliferation | IEP | Neighborhood |
| CC | GO:0042645 | mitochondrial nucleoid | IEP | Neighborhood |
| BP | GO:0048314 | embryo sac morphogenesis | IEP | Neighborhood |
| CC | GO:0048353 | primary endosperm nucleus | IEP | Neighborhood |
| BP | GO:0048437 | floral organ development | IEP | Neighborhood |
| BP | GO:0048440 | carpel development | IEP | Neighborhood |
| BP | GO:0048443 | stamen development | IEP | Neighborhood |
| BP | GO:0048444 | floral organ morphogenesis | IEP | Neighborhood |
| BP | GO:0048446 | petal morphogenesis | IEP | Neighborhood |
| BP | GO:0048449 | floral organ formation | IEP | Neighborhood |
| BP | GO:0048451 | petal formation | IEP | Neighborhood |
| BP | GO:0048453 | sepal formation | IEP | Neighborhood |
| BP | GO:0048462 | carpel formation | IEP | Neighborhood |
| BP | GO:0048467 | gynoecium development | IEP | Neighborhood |
| BP | GO:0048482 | plant ovule morphogenesis | IEP | Neighborhood |
| BP | GO:0048506 | regulation of timing of meristematic phase transition | IEP | Neighborhood |
| BP | GO:0048507 | meristem development | IEP | Neighborhood |
| BP | GO:0048509 | regulation of meristem development | IEP | Neighborhood |
| BP | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | IEP | Neighborhood |
| BP | GO:0048530 | fruit morphogenesis | IEP | Neighborhood |
| BP | GO:0048598 | embryonic morphogenesis | IEP | Neighborhood |
| BP | GO:0048608 | reproductive structure development | IEP | Neighborhood |
| BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | Neighborhood |
| BP | GO:0048653 | anther development | IEP | Neighborhood |
| BP | GO:0048827 | phyllome development | IEP | Neighborhood |
| BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
| BP | GO:0048859 | formation of anatomical boundary | IEP | Neighborhood |
| BP | GO:0051131 | chaperone-mediated protein complex assembly | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051259 | protein complex oligomerization | IEP | Neighborhood |
| BP | GO:0051260 | protein homooligomerization | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065001 | specification of axis polarity | IEP | Neighborhood |
| BP | GO:0070407 | oxidation-dependent protein catabolic process | IEP | Neighborhood |
| BP | GO:0080060 | integument development | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:0090567 | reproductive shoot system development | IEP | Neighborhood |
| BP | GO:0090697 | post-embryonic plant organ morphogenesis | IEP | Neighborhood |
| BP | GO:0090698 | post-embryonic plant morphogenesis | IEP | Neighborhood |
| BP | GO:0090701 | specification of plant organ identity | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| CC | GO:0098590 | plasma membrane region | IEP | Neighborhood |
| BP | GO:0099402 | plant organ development | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1905392 | plant organ morphogenesis | IEP | Neighborhood |
| BP | GO:1905393 | plant organ formation | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
