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  5. LOC_Os01g67480.1

LOC_Os01g67480.1


Description : transcription factor (bHLH)


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000668 (LandPlants) Phylogenetic Tree(s): OG_05_0000668_tree ,
OG_06_0000736 (SeedPlants) Phylogenetic Tree(s): OG_06_0000736_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g67480.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.02 Archaeplastida
AMTR_s00022p00228970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AMTR_s00065p00184910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G18400 BEE1 BR enhanced expression 1 0.04 Archaeplastida
AT1G25330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT1G26260 CIB5 cryptochrome-interacting basic-helix-loop-helix 5 0.03 Archaeplastida
AT1G51140 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G42280 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT3G07340 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT3G23690 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT3G57800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01007389001 No alias External stimuli response.light.UV-A/blue... 0.04 Archaeplastida
GSVIVT01021787001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01023783001 No alias External stimuli response.light.UV-A/blue... 0.04 Archaeplastida
GSVIVT01025313001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_05320 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_21366 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_36369 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
LOC_Os01g68700.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
MA_158850g0010 No alias transcription factor (bHLH) 0.06 Archaeplastida
MA_939320g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c15_4760V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
Pp3c15_4770V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
Pp3c16_7710V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c17_17000V3.1 No alias LJRHL1-like 1 0.03 Archaeplastida
Pp3c1_33270V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c20_590V3.1 No alias cryptochrome-interacting basic-helix-loop-helix 5 0.02 Archaeplastida
Pp3c9_3300V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Smo24892 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Smo443113 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc01g109700.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc04g007300.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc04g077480.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc05g006650.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Solyc12g010170.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e010060_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e010540_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e011084_P002 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Zm00001e011866_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e015045_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e018946_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e028489_P003 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e032950_P002 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e034528_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 321 366
No external refs found!