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  5. LOC_Os01g68700.1

LOC_Os01g68700.1


Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000091 (LandPlants) Phylogenetic Tree(s): OG_05_0000091_tree ,
OG_06_0017427 (SeedPlants) Phylogenetic Tree(s): OG_06_0017427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g68700.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.04 Archaeplastida
AMTR_s00022p00228970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00079p00137860 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.05 Archaeplastida
AT3G57800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT5G48560 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G50915 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT5G58010 LRL3 LJRHL1-like 3 0.03 Archaeplastida
AT5G62610 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01023585001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01025313001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01033356001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_12493 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Gb_33185 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Gb_36369 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Gb_39758 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
LOC_Os01g67480.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os09g25040.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_158362g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
MA_158850g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_42080g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Mpzg01410.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c12_25990V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c15_4770V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c20_590V3.1 No alias cryptochrome-interacting basic-helix-loop-helix 5 0.02 Archaeplastida
Pp3c21_14114V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Smo24892 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc01g010130.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc01g109700.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Solyc02g062690.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.06 Archaeplastida
Solyc03g034000.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc03g113560.4.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc03g119390.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc04g007300.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc04g077480.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc05g006650.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Solyc06g072520.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Solyc06g083170.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc12g098620.2.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
Zm00001e009823_P002 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e010060_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e015045_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e023327_P001 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Zm00001e032950_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e036318_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 287 334
No external refs found!