1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g68860.1

LOC_Os01g68860.1


Description : C3H zinc finger transcription factor


Gene families : OG0000421 (Archaeplastida) Phylogenetic Tree(s): OG0000421_tree ,
OG_05_0000820 (LandPlants) Phylogenetic Tree(s): OG_05_0000820_tree ,
OG_06_0002308 (SeedPlants) Phylogenetic Tree(s): OG_06_0002308_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g68860.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT3G06410 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Archaeplastida
AT3G48440 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 Archaeplastida
Cre16.g689535 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 Archaeplastida
GSVIVT01019118001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida
MA_10435282g0010 No alias C3H zinc finger transcription factor 0.05 Archaeplastida
Zm00001e018849_P004 No alias C3H zinc finger transcription factor 0.07 Archaeplastida
Zm00001e021472_P004 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 380 404
IPR000571 Znf_CCCH 174 198
IPR000571 Znf_CCCH 127 152
IPR000571 Znf_CCCH 82 107
IPR000571 Znf_CCCH 334 359
No external refs found!