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LOC_Os01g69270.1


Description : F-box protein At1g67340 OS=Arabidopsis thaliana (sp|q9fyf9|fb76_arath : 223.0)


Gene families : OG0001026 (Archaeplastida) Phylogenetic Tree(s): OG0001026_tree ,
OG_05_0000958 (LandPlants) Phylogenetic Tree(s): OG_05_0000958_tree ,
OG_06_0001615 (SeedPlants) Phylogenetic Tree(s): OG_06_0001615_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g69270.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00182670 evm_27.TU.AmTr_v1... F-box protein At1g67340 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cpa|evm.model.tig00021108.25 No alias No description available 0.02 Archaeplastida
Gb_35548 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Smo171141 No alias F-box protein At1g67340 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo66287 No alias F-box protein At1g67340 OS=Arabidopsis thaliana 0.1 Archaeplastida
Zm00001e008387_P001 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e018821_P001 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e028443_P002 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002893 Znf_MYND 315 355
No external refs found!