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  5. LOC_Os01g70780.1

LOC_Os01g70780.1


Description : component ATG18 of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG0001600 (Archaeplastida) Phylogenetic Tree(s): OG0001600_tree ,
OG_05_0001405 (LandPlants) Phylogenetic Tree(s): OG_05_0001405_tree ,
OG_06_0001795 (SeedPlants) Phylogenetic Tree(s): OG_06_0001795_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g70780.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AT2G40810 ATG18C, ATATG18C homolog of yeast autophagy 18C 0.02 Archaeplastida
AT3G62770 AtATG18a Transducin/WD40 repeat-like superfamily protein 0.05 Archaeplastida
GSVIVT01010945001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 Archaeplastida
MA_205985g0010 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Mp1g16930.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida
Pp3c5_5710V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Archaeplastida
Zm00001e016794_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 274 302
IPR001680 WD40_repeat 320 351
No external refs found!